Dr David Stanton
(Translated he/him)
PhD, BSc (Hons)
Darlithydd
Ysgol y Biowyddorau
- StantonDW@caerdydd.ac.uk
- +44 29225 14649
- Adeilad Syr Martin Evans, Ystafell C/6.10, Rhodfa'r Amgueddfa, Caerdydd, CF10 3AX
- Ar gael fel goruchwyliwr ôl-raddedig
Trosolwyg
Rwy'n genetegydd esblygiadol sydd â diddordeb mewn deall sut mae prosesau naturiol ac anthropogenig yn ymwneud â newid bioamrywiaeth. Er mwyn gwneud hyn, credaf fod angen dealltwriaeth o fioamrywiaeth hanesyddol yn gyntaf.
Mae fy ymchwil yn ymchwilio i'r amrywiaeth hwn yn y gorffennol ym mhoblogaethau anifeiliaid gwyllt, gan ddefnyddio DNA hanesyddol a hynafol, ac yn ei gymharu â'r rhai sy'n fyw heddiw. Y nod yn y pen draw yw defnyddio'r cymariaethau hyn i wella ein rhagfynegiadau o sut mae bioamrywiaeth heddiw yn debygol o newid i'r dyfodol.
Rwyf wedi gweithio ar ystod eang o wahanol dacsa a systemau astudio, gyda ffocws diweddar ar gigysyddion diflanedig fel llewod ogofâu, Homotherium, blaidd Ynysoedd y Falkland, a phoblogaethau blaidd hynafol o Ewrasia.
Oes gennych chi ddiddordeb mewn ymuno â'm grŵp ymchwil?
Mae gen i gyfleoedd i fyfyrwyr israddedig, Meistr a PhD, cysylltwch os oes gennych ddiddordeb.
Cyhoeddiad
2023
- Lin, A. T. et al. 2023. The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge. Science 382(6676), pp. 1303-1308. (10.1126/science.adi6549)
- Conrado, A. C. et al. 2023. Amazonian earthworm biodiversity is heavily impacted by ancient and recent human disturbance. Science of the Total Environment 895, article number: 165087. (10.1016/j.scitotenv.2023.165087)
2022
- Moorhouse-Gann, R. J. et al. 2022. Impacts of herbivory by ecological replacements on an island ecosystem. Journal of Applied Ecology 59(9), pp. 2245-2261. (10.1111/1365-2664.14096)
- Bergström, A. et al. 2022. Grey wolf genomic history reveals a dual ancestry of dogs. Nature 607(7918), pp. 313-320. (10.1038/s41586-022-04824-9)
- Kutschera, V. E. et al. 2022. GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species. BMC Bioinformatics 23(1), article number: 228. (10.1186/s12859-022-04757-0)
2021
- Demetrio, W. C. et al. 2021. A "Dirty" Footprint: Macroinvertebrate diversity in Amazonian Anthropic Soils. Global Change Biology 27(19), pp. 4575-4591. (10.1111/gcb.15752)
- Boeskorov, G. G. et al. 2021. The preliminary analysis of cave lion cubs panthera spelaea (Goldfuss, 1810) from the permafrost of Siberia. Quaternary 4(3), article number: 24. (10.3390/quat4030024)
2020
- Lord, E. et al. 2020. Pre-extinction demographic stability and genomic signatures of adaptation in the woolly rhinoceros. Current Biology 30(19), pp. 3871-3879.E7. (10.1016/j.cub.2020.07.046)
- Stanton, D. W. G. et al. 2020. Early Pleistocene origin and extensive intra-species diversity of the extinct cave lion. Scientific Reports 10, article number: 12621. (10.1038/s41598-020-69474-1)
- Dussex, N. et al. 2020. Biomolecular analyses reveal the age, sex and species identity of a near-intact Pleistocene bird carcass. Communications Biology 3(1), article number: 84. (10.1038/s42003-020-0806-7)
2019
- Larsson, P. et al. 2019. Consequences of past climate change and recent human persecution on mitogenomic diversity in the arctic fox. Philosophical Transactions of the Royal Society B: Biological Sciences 374(1788), article number: 20190212. (10.1098/rstb.2019.0212)
- Stanton, D. W. G. et al. 2019. More grist for the mill?: Species delimitation in the genomic era and its implications for conservation. Conservation Genetics 20(1), pp. 101-113. (10.1007/s10592-019-01149-5)
- James, S. W. et al. 2019. A neotype for Pontoscolex corethrurus (Müller, 1857) (Clitellata). Zootaxa 4545(1), pp. 124-132. (10.11646/zootaxa.4545.1.7)
2018
- Taheri, S. et al. 2018. Complex taxonomy of the ‘brush tail’ peregrine earthworm Pontoscolex corethrurus. Molecular Phylogenetics and Evolution 124, pp. 60-70. (10.1016/j.ympev.2018.02.021)
2017
- Conrado, A. C. et al. 2017. The complete mitochondrial DNA sequence of the pantropical earthworm Pontoscolex corethrurus (Rhinodrilidae, Clitellata): Mitogenome characterization and phylogenetic positioning. ZooKeys 688, pp. 1-13. (10.3897/zookeys.688.13721)
2016
- Sitko, J., Bizos, J., Sherrard-Smith, E., Stanton, D. W., Komorová, P. and Heneberg, P. 2016. Integrative taxonomy of European parasitic flatworms of the genus Metorchis Looss, 1899 (Trematoda: Opisthorchiidae). Parasitology International 65(3), pp. 258-267. (10.1016/j.parint.2016.01.011)
- Stanton, D. W. G., Mulville, J. A. and Bruford, M. W. 2016. Colonization of the Scottish islands via long-distance Neolithic transport of red deer (Cervus elaphus). Proceedings of the Royal Society B: Biological Sciences 283(1828), article number: 20160095. (10.1098/rspb.2016.0095)
- Sherrard-Smith, E. et al. 2016. Distribution and molecular phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe. Parasitology International 65(2), pp. 163-170. (10.1016/j.parint.2015.11.007)
- Cunha, L. et al. 2016. Soil animals and pedogenesis: The role of earthworms in anthropogenic soils. Soil Science 181(3/4), pp. 110-125. (10.1097/SS.0000000000000144)
- Stanton, D. W. G., Hart, J., Vosper, A., Kümpel, N. F., Wang, J., Ewen, J. G. and Bruford, M. W. 2016. Non-invasive genetic identification confirms the presence of the endangered okapi Okapia Johnstoni south-west of the Congo River. Oryx 50(1), pp. 134-137. (10.1017/S0030605314000593)
2015
- Stanton, D. W. G. et al. 2015. Genetic structure of captive and free-ranging okapi (Okapia johnstoni) with implications for management. Conservation Genetics 16(5), pp. 1115-1126. (10.1007/s10592-015-0726-0)
- Stanton, D. W. G. et al. 2015. Enhancing knowledge of an endangered and elusive species, the okapi, using non-invasive genetic techniques. Journal of Zoology 295(4), pp. 233-242. (10.1111/jzo.12205)
2014
- Stanton, D. W. G. et al. 2014. Contrasting genetic structure of the Eurasian otter (Lutra lutra) across a latitudinal divide. Journal of Mammalogy 95(4), pp. 814-823. (10.1644/13-MAMM-A-201)
- Stanton, D. W. G. et al. 2014. Distinct and diverse: range-wide phylogeography reveals ancient lineages and high genetic variation in the endangered okapi (Okapia johnstoni). PLoS ONE 9(7), article number: e101081. (10.1371/journal.pone.0101081)
- Morrissey, C. A., Stanton, D. W., Tyler, C. R., Pereira, M. G., Newton, J., Durance, I. and Ormerod, S. J. 2014. Developmental impairment in eurasian dipper nestlings exposed to urban stream pollutants. Environmental Toxicology and Chemistry 33(6), pp. 1315-1323. (10.1002/etc.2555)
- Stanton, D. W. G. 2014. Phylogeography, population genetics and conservation of the okapi (Okapia johnstoni). PhD Thesis, Cardiff University.
2013
- Crowther, T. et al. 2013. Top-down control of soil fungal community composition by a globally distributed keystone consumer. Ecology 94(11), pp. 2518-2528. (10.1890/13-0197.1)
- McCann, N., Orozco ter Wengel, P. O. and Stanton, D. 2013. Modelling genetics within ecosystems. Nature 495(7439), pp. 47-47. (10.1038/495047d)
- Morrissey, C., Stanton, D. W. G., Pereira, M. G., Newton, J., Durance, I., Tyler, C. R. and Ormerod, S. J. 2013. Eurasian dipper eggs indicate elevated organohalogenated contaminants persist in urban rivers. Environmental Science & Technology 47(15), pp. 8931-8939. (10.1021/es402124z)
2010
- Salgado-Lynn, M., Stanton, D. W. G., Sakong, R., Cable, J., Goossens, B. and Bruford, M. W. 2010. Microsatellite markers for the proboscis monkey (Nasalis larvatus). Conservation Genetics Resources 2(Supp 1), pp. 159-163. (10.1007/s12686-010-9295-1)
- Stanton, D. W. G., Penfold, L. M., Zhan, X. and Bruford, M. W. 2010. Microsatellite loci for the okapi (Okapia johnstoni). Conservation Genetics Resources 2(Supp 1), pp. 337-339. (10.1007/s12686-010-9235-0)
2009
- Stanton, D. W. G., Hobbs, G. I., Chadwick, E. A., Slater, F. M. and Bruford, M. W. 2009. Mitochondrial genetic diversity and structure of the European otter (Lutra lutra) in Britain. Conservation Genetics 10(3), pp. 733-737. (10.1007/s10592-008-9633-y)
Articles
- Lin, A. T. et al. 2023. The history of Coast Salish “woolly dogs” revealed by ancient genomics and Indigenous Knowledge. Science 382(6676), pp. 1303-1308. (10.1126/science.adi6549)
- Conrado, A. C. et al. 2023. Amazonian earthworm biodiversity is heavily impacted by ancient and recent human disturbance. Science of the Total Environment 895, article number: 165087. (10.1016/j.scitotenv.2023.165087)
- Moorhouse-Gann, R. J. et al. 2022. Impacts of herbivory by ecological replacements on an island ecosystem. Journal of Applied Ecology 59(9), pp. 2245-2261. (10.1111/1365-2664.14096)
- Bergström, A. et al. 2022. Grey wolf genomic history reveals a dual ancestry of dogs. Nature 607(7918), pp. 313-320. (10.1038/s41586-022-04824-9)
- Kutschera, V. E. et al. 2022. GenErode: a bioinformatics pipeline to investigate genome erosion in endangered and extinct species. BMC Bioinformatics 23(1), article number: 228. (10.1186/s12859-022-04757-0)
- Demetrio, W. C. et al. 2021. A "Dirty" Footprint: Macroinvertebrate diversity in Amazonian Anthropic Soils. Global Change Biology 27(19), pp. 4575-4591. (10.1111/gcb.15752)
- Boeskorov, G. G. et al. 2021. The preliminary analysis of cave lion cubs panthera spelaea (Goldfuss, 1810) from the permafrost of Siberia. Quaternary 4(3), article number: 24. (10.3390/quat4030024)
- Lord, E. et al. 2020. Pre-extinction demographic stability and genomic signatures of adaptation in the woolly rhinoceros. Current Biology 30(19), pp. 3871-3879.E7. (10.1016/j.cub.2020.07.046)
- Stanton, D. W. G. et al. 2020. Early Pleistocene origin and extensive intra-species diversity of the extinct cave lion. Scientific Reports 10, article number: 12621. (10.1038/s41598-020-69474-1)
- Dussex, N. et al. 2020. Biomolecular analyses reveal the age, sex and species identity of a near-intact Pleistocene bird carcass. Communications Biology 3(1), article number: 84. (10.1038/s42003-020-0806-7)
- Larsson, P. et al. 2019. Consequences of past climate change and recent human persecution on mitogenomic diversity in the arctic fox. Philosophical Transactions of the Royal Society B: Biological Sciences 374(1788), article number: 20190212. (10.1098/rstb.2019.0212)
- Stanton, D. W. G. et al. 2019. More grist for the mill?: Species delimitation in the genomic era and its implications for conservation. Conservation Genetics 20(1), pp. 101-113. (10.1007/s10592-019-01149-5)
- James, S. W. et al. 2019. A neotype for Pontoscolex corethrurus (Müller, 1857) (Clitellata). Zootaxa 4545(1), pp. 124-132. (10.11646/zootaxa.4545.1.7)
- Taheri, S. et al. 2018. Complex taxonomy of the ‘brush tail’ peregrine earthworm Pontoscolex corethrurus. Molecular Phylogenetics and Evolution 124, pp. 60-70. (10.1016/j.ympev.2018.02.021)
- Conrado, A. C. et al. 2017. The complete mitochondrial DNA sequence of the pantropical earthworm Pontoscolex corethrurus (Rhinodrilidae, Clitellata): Mitogenome characterization and phylogenetic positioning. ZooKeys 688, pp. 1-13. (10.3897/zookeys.688.13721)
- Sitko, J., Bizos, J., Sherrard-Smith, E., Stanton, D. W., Komorová, P. and Heneberg, P. 2016. Integrative taxonomy of European parasitic flatworms of the genus Metorchis Looss, 1899 (Trematoda: Opisthorchiidae). Parasitology International 65(3), pp. 258-267. (10.1016/j.parint.2016.01.011)
- Stanton, D. W. G., Mulville, J. A. and Bruford, M. W. 2016. Colonization of the Scottish islands via long-distance Neolithic transport of red deer (Cervus elaphus). Proceedings of the Royal Society B: Biological Sciences 283(1828), article number: 20160095. (10.1098/rspb.2016.0095)
- Sherrard-Smith, E. et al. 2016. Distribution and molecular phylogeny of biliary trematodes (Opisthorchiidae) infecting native Lutra lutra and alien Neovison vison across Europe. Parasitology International 65(2), pp. 163-170. (10.1016/j.parint.2015.11.007)
- Cunha, L. et al. 2016. Soil animals and pedogenesis: The role of earthworms in anthropogenic soils. Soil Science 181(3/4), pp. 110-125. (10.1097/SS.0000000000000144)
- Stanton, D. W. G., Hart, J., Vosper, A., Kümpel, N. F., Wang, J., Ewen, J. G. and Bruford, M. W. 2016. Non-invasive genetic identification confirms the presence of the endangered okapi Okapia Johnstoni south-west of the Congo River. Oryx 50(1), pp. 134-137. (10.1017/S0030605314000593)
- Stanton, D. W. G. et al. 2015. Genetic structure of captive and free-ranging okapi (Okapia johnstoni) with implications for management. Conservation Genetics 16(5), pp. 1115-1126. (10.1007/s10592-015-0726-0)
- Stanton, D. W. G. et al. 2015. Enhancing knowledge of an endangered and elusive species, the okapi, using non-invasive genetic techniques. Journal of Zoology 295(4), pp. 233-242. (10.1111/jzo.12205)
- Stanton, D. W. G. et al. 2014. Contrasting genetic structure of the Eurasian otter (Lutra lutra) across a latitudinal divide. Journal of Mammalogy 95(4), pp. 814-823. (10.1644/13-MAMM-A-201)
- Stanton, D. W. G. et al. 2014. Distinct and diverse: range-wide phylogeography reveals ancient lineages and high genetic variation in the endangered okapi (Okapia johnstoni). PLoS ONE 9(7), article number: e101081. (10.1371/journal.pone.0101081)
- Morrissey, C. A., Stanton, D. W., Tyler, C. R., Pereira, M. G., Newton, J., Durance, I. and Ormerod, S. J. 2014. Developmental impairment in eurasian dipper nestlings exposed to urban stream pollutants. Environmental Toxicology and Chemistry 33(6), pp. 1315-1323. (10.1002/etc.2555)
- Crowther, T. et al. 2013. Top-down control of soil fungal community composition by a globally distributed keystone consumer. Ecology 94(11), pp. 2518-2528. (10.1890/13-0197.1)
- McCann, N., Orozco ter Wengel, P. O. and Stanton, D. 2013. Modelling genetics within ecosystems. Nature 495(7439), pp. 47-47. (10.1038/495047d)
- Morrissey, C., Stanton, D. W. G., Pereira, M. G., Newton, J., Durance, I., Tyler, C. R. and Ormerod, S. J. 2013. Eurasian dipper eggs indicate elevated organohalogenated contaminants persist in urban rivers. Environmental Science & Technology 47(15), pp. 8931-8939. (10.1021/es402124z)
- Salgado-Lynn, M., Stanton, D. W. G., Sakong, R., Cable, J., Goossens, B. and Bruford, M. W. 2010. Microsatellite markers for the proboscis monkey (Nasalis larvatus). Conservation Genetics Resources 2(Supp 1), pp. 159-163. (10.1007/s12686-010-9295-1)
- Stanton, D. W. G., Penfold, L. M., Zhan, X. and Bruford, M. W. 2010. Microsatellite loci for the okapi (Okapia johnstoni). Conservation Genetics Resources 2(Supp 1), pp. 337-339. (10.1007/s12686-010-9235-0)
- Stanton, D. W. G., Hobbs, G. I., Chadwick, E. A., Slater, F. M. and Bruford, M. W. 2009. Mitochondrial genetic diversity and structure of the European otter (Lutra lutra) in Britain. Conservation Genetics 10(3), pp. 733-737. (10.1007/s10592-008-9633-y)
Thesis
- Stanton, D. W. G. 2014. Phylogeography, population genetics and conservation of the okapi (Okapia johnstoni). PhD Thesis, Cardiff University.
Ymchwil
Mae fy ymchwil yn defnyddio dulliau maes, moleciwlaidd a dadansoddol i geisio deall pam mae bioamrywiaeth yn newid dros amser. Rwy'n defnyddio DNA a biowybodeg hynafol yn bennaf i drosoli gwybodaeth o sbesimenau hen neu ddiraddiedig.
Cyllid
Cefnogwyd fy ngwaith gan y cyllidwyr canlynol:
- ANCHG
- Comisiwn Ewropeaidd (Cymrodoriaeth Unigol Marie Skłodowska-Curie)
- Canolfan Amlddisgyblaethol Uppsala ar gyfer Gwyddoniaeth Gyfrifiadurol Uwch
- Wellcome
- Ysgol y Biowyddorau Prifysgol Caerdydd
- PacBio
- Cadwraeth Ryngwladol Gilman
- Cymdeithas Sŵolegol Llundain
Maes
Mae fy ymchwil yn cynnwys/cynnwys gwaith maes yn y lleoliadau canlynol:
- De America (Taleithiau Brasil Paraná, Mato Grosso do Sol, Mato Grosso, Rondônia, Amazonas)
- Gweriniaeth Ddemocrataidd y Congo (Gwarchodfa Faunal Okapi a Pharc Cenedlaethol Lomami)
- Honduras (Parc Cenedlaethol Cusuco)
- De Cymru (Taf, Rhymni, Sirhywi, a dalgylchoedd afon Ebwy)
- Borneo Malaysia (Canolfan FIeld Danau Girang, Afon Kinabatangan)
Bywgraffiad
Gyrfa academaidd hyd yn hyn:
- 2022 - presennol: Darlithydd (Ysgol Biowyddorau Prifysgol Caerdydd)
- 2020 – 2022: Ymchwilydd ôl-ddoethurol (Prifysgol y Frenhines Mary, Llundain)
- 2018 – 2020: Cymrawd Ymchwil Marie Skłodowska-Curie (Amgueddfa Hanes Naturiol Sweden)
- 2015 – 2018: Cydymaith Ymchwil (Prifysgol Caerdydd)
- 2010 – 2015: PhD (Prifysgol Caerdydd)
- 2007 – 2010: Cynorthwy-ydd Ymchwil (Prifysgol Caerdydd)
- 2004 – 2007: BSc Bioleg (Prifysgol Caerdydd)
Anrhydeddau a Gwobrau:
- Cymrawd Anrhydeddus, Ysgol Hanes, Archaeoleg a Chrefydd Prifysgol Caerdydd (2018)
- Cymrawd Anrhydeddus, Ysgol y Biowyddorau Prifysgol Caerdydd (2018)